# Copyright 2017 The TensorFlow Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # ============================================================================== """Package for histogram compression.""" from __future__ import absolute_import from __future__ import division from __future__ import print_function import collections import numpy as np # Normal CDF for std_devs: (-Inf, -1.5, -1, -0.5, 0, 0.5, 1, 1.5, Inf) # naturally gives bands around median of width 1 std dev, 2 std dev, 3 std dev, # and then the long tail. NORMAL_HISTOGRAM_BPS = (0, 668, 1587, 3085, 5000, 6915, 8413, 9332, 10000) CompressedHistogramValue = collections.namedtuple('CompressedHistogramValue', ['basis_point', 'value']) # TODO(@jart): Unfork these methods. def compress_histogram_proto(histo, bps=NORMAL_HISTOGRAM_BPS): """Creates fixed size histogram by adding compression to accumulated state. This routine transforms a histogram at a particular step by interpolating its variable number of buckets to represent their cumulative weight at a constant number of compression points. This significantly reduces the size of the histogram and makes it suitable for a two-dimensional area plot where the output of this routine constitutes the ranges for a single x coordinate. Args: histo: A HistogramProto object. bps: Compression points represented in basis points, 1/100ths of a percent. Defaults to normal distribution. Returns: List of values for each basis point. """ # See also: Histogram::Percentile() in core/lib/histogram/histogram.cc if not histo.num: return [CompressedHistogramValue(b, 0.0) for b in bps] bucket = np.array(histo.bucket) bucket_limit = list(histo.bucket_limit) weights = (bucket * bps[-1] / (bucket.sum() or 1.0)).cumsum() values = [] j = 0 while j < len(bps): i = np.searchsorted(weights, bps[j], side='right') while i < len(weights): cumsum = weights[i] cumsum_prev = weights[i - 1] if i > 0 else 0.0 if cumsum == cumsum_prev: # prevent lerp divide by zero i += 1 continue if not i or not cumsum_prev: lhs = histo.min else: lhs = max(bucket_limit[i - 1], histo.min) rhs = min(bucket_limit[i], histo.max) weight = _lerp(bps[j], cumsum_prev, cumsum, lhs, rhs) values.append(CompressedHistogramValue(bps[j], weight)) j += 1 break else: break while j < len(bps): values.append(CompressedHistogramValue(bps[j], histo.max)) j += 1 return values def compress_histogram(buckets, bps=NORMAL_HISTOGRAM_BPS): """Creates fixed size histogram by adding compression to accumulated state. This routine transforms a histogram at a particular step by linearly interpolating its variable number of buckets to represent their cumulative weight at a constant number of compression points. This significantly reduces the size of the histogram and makes it suitable for a two-dimensional area plot where the output of this routine constitutes the ranges for a single x coordinate. Args: buckets: A list of buckets, each of which is a 3-tuple of the form `(min, max, count)`. bps: Compression points represented in basis points, 1/100ths of a percent. Defaults to normal distribution. Returns: List of values for each basis point. """ # See also: Histogram::Percentile() in core/lib/histogram/histogram.cc buckets = np.array(buckets) if not buckets.size: return [CompressedHistogramValue(b, 0.0) for b in bps] (minmin, maxmax) = (buckets[0][0], buckets[-1][1]) counts = buckets[:, 2] right_edges = list(buckets[:, 1]) weights = (counts * bps[-1] / (counts.sum() or 1.0)).cumsum() result = [] bp_index = 0 while bp_index < len(bps): i = np.searchsorted(weights, bps[bp_index], side='right') while i < len(weights): cumsum = weights[i] cumsum_prev = weights[i - 1] if i > 0 else 0.0 if cumsum == cumsum_prev: # prevent division-by-zero in `_lerp` i += 1 continue if not i or not cumsum_prev: lhs = minmin else: lhs = max(right_edges[i - 1], minmin) rhs = min(right_edges[i], maxmax) weight = _lerp(bps[bp_index], cumsum_prev, cumsum, lhs, rhs) result.append(CompressedHistogramValue(bps[bp_index], weight)) bp_index += 1 break else: break while bp_index < len(bps): result.append(CompressedHistogramValue(bps[bp_index], maxmax)) bp_index += 1 return result def _lerp(x, x0, x1, y0, y1): """Affinely map from [x0, x1] onto [y0, y1].""" return y0 + (x - x0) * float(y1 - y0) / (x1 - x0)