613 lines
21 KiB
Python
613 lines
21 KiB
Python
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from __future__ import division, print_function, absolute_import
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import warnings
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from . import _zeros
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from numpy import finfo, sign, sqrt
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_iter = 100
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_xtol = 2e-12
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_rtol = 4*finfo(float).eps
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__all__ = ['newton', 'bisect', 'ridder', 'brentq', 'brenth']
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CONVERGED = 'converged'
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SIGNERR = 'sign error'
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CONVERR = 'convergence error'
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flag_map = {0: CONVERGED, -1: SIGNERR, -2: CONVERR}
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class RootResults(object):
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""" Represents the root finding result.
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Attributes
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----------
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root : float
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Estimated root location.
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iterations : int
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Number of iterations needed to find the root.
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function_calls : int
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Number of times the function was called.
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converged : bool
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True if the routine converged.
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flag : str
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Description of the cause of termination.
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"""
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def __init__(self, root, iterations, function_calls, flag):
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self.root = root
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self.iterations = iterations
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self.function_calls = function_calls
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self.converged = flag == 0
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try:
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self.flag = flag_map[flag]
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except KeyError:
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self.flag = 'unknown error %d' % (flag,)
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def __repr__(self):
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attrs = ['converged', 'flag', 'function_calls',
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'iterations', 'root']
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m = max(map(len, attrs)) + 1
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return '\n'.join([a.rjust(m) + ': ' + repr(getattr(self, a))
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for a in attrs])
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def results_c(full_output, r):
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if full_output:
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x, funcalls, iterations, flag = r
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results = RootResults(root=x,
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iterations=iterations,
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function_calls=funcalls,
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flag=flag)
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return x, results
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else:
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return r
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# Newton-Raphson method
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def newton(func, x0, fprime=None, args=(), tol=1.48e-8, maxiter=50,
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fprime2=None):
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"""
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Find a zero using the Newton-Raphson or secant method.
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Find a zero of the function `func` given a nearby starting point `x0`.
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The Newton-Raphson method is used if the derivative `fprime` of `func`
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is provided, otherwise the secant method is used. If the second order
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derivative `fprime2` of `func` is provided, then Halley's method is used.
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Parameters
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----------
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func : function
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The function whose zero is wanted. It must be a function of a
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single variable of the form f(x,a,b,c...), where a,b,c... are extra
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arguments that can be passed in the `args` parameter.
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x0 : float
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An initial estimate of the zero that should be somewhere near the
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actual zero.
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fprime : function, optional
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The derivative of the function when available and convenient. If it
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is None (default), then the secant method is used.
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args : tuple, optional
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Extra arguments to be used in the function call.
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tol : float, optional
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The allowable error of the zero value.
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maxiter : int, optional
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Maximum number of iterations.
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fprime2 : function, optional
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The second order derivative of the function when available and
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convenient. If it is None (default), then the normal Newton-Raphson
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or the secant method is used. If it is not None, then Halley's method
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is used.
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Returns
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-------
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zero : float
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Estimated location where function is zero.
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See Also
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--------
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brentq, brenth, ridder, bisect
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fsolve : find zeroes in n dimensions.
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Notes
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-----
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The convergence rate of the Newton-Raphson method is quadratic,
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the Halley method is cubic, and the secant method is
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sub-quadratic. This means that if the function is well behaved
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the actual error in the estimated zero is approximately the square
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(cube for Halley) of the requested tolerance up to roundoff
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error. However, the stopping criterion used here is the step size
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and there is no guarantee that a zero has been found. Consequently
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the result should be verified. Safer algorithms are brentq,
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brenth, ridder, and bisect, but they all require that the root
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first be bracketed in an interval where the function changes
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sign. The brentq algorithm is recommended for general use in one
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dimensional problems when such an interval has been found.
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Examples
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--------
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>>> def f(x):
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... return (x**3 - 1) # only one real root at x = 1
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>>> from scipy import optimize
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``fprime`` not provided, use secant method
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>>> root = optimize.newton(f, 1.5)
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>>> root
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1.0000000000000016
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>>> root = optimize.newton(f, 1.5, fprime2=lambda x: 6 * x)
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>>> root
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1.0000000000000016
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Only ``fprime`` provided, use Newton Raphson method
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>>> root = optimize.newton(f, 1.5, fprime=lambda x: 3 * x**2)
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>>> root
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1.0
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Both ``fprime2`` and ``fprime`` provided, use Halley's method
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>>> root = optimize.newton(f, 1.5, fprime=lambda x: 3 * x**2,
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... fprime2=lambda x: 6 * x)
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>>> root
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1.0
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"""
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if tol <= 0:
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raise ValueError("tol too small (%g <= 0)" % tol)
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if maxiter < 1:
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raise ValueError("maxiter must be greater than 0")
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# Multiply by 1.0 to convert to floating point. We don't use float(x0)
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# so it still works if x0 is complex.
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p0 = 1.0 * x0
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if fprime is not None:
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# Newton-Rapheson method
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for iter in range(maxiter):
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fder = fprime(p0, *args)
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if fder == 0:
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msg = "derivative was zero."
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warnings.warn(msg, RuntimeWarning)
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return p0
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fval = func(p0, *args)
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newton_step = fval / fder
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if fprime2 is None:
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# Newton step
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p = p0 - newton_step
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else:
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fder2 = fprime2(p0, *args)
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# Halley's method
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p = p0 - newton_step / (1.0 - 0.5 * newton_step * fder2 / fder)
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if abs(p - p0) < tol:
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return p
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p0 = p
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else:
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# Secant method
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if x0 >= 0:
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p1 = x0*(1 + 1e-4) + 1e-4
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else:
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p1 = x0*(1 + 1e-4) - 1e-4
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q0 = func(p0, *args)
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q1 = func(p1, *args)
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for iter in range(maxiter):
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if q1 == q0:
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if p1 != p0:
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msg = "Tolerance of %s reached" % (p1 - p0)
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warnings.warn(msg, RuntimeWarning)
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return (p1 + p0)/2.0
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else:
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p = p1 - q1*(p1 - p0)/(q1 - q0)
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if abs(p - p1) < tol:
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return p
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p0 = p1
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q0 = q1
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p1 = p
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q1 = func(p1, *args)
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msg = "Failed to converge after %d iterations, value is %s" % (maxiter, p)
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raise RuntimeError(msg)
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def bisect(f, a, b, args=(),
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xtol=_xtol, rtol=_rtol, maxiter=_iter,
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full_output=False, disp=True):
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"""
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Find root of a function within an interval.
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Basic bisection routine to find a zero of the function `f` between the
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arguments `a` and `b`. `f(a)` and `f(b)` cannot have the same signs.
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Slow but sure.
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Parameters
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----------
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f : function
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Python function returning a number. `f` must be continuous, and
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f(a) and f(b) must have opposite signs.
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a : number
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One end of the bracketing interval [a,b].
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b : number
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The other end of the bracketing interval [a,b].
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xtol : number, optional
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The computed root ``x0`` will satisfy ``np.allclose(x, x0,
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atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
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parameter must be nonnegative.
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rtol : number, optional
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The computed root ``x0`` will satisfy ``np.allclose(x, x0,
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atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
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parameter cannot be smaller than its default value of
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``4*np.finfo(float).eps``.
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maxiter : number, optional
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if convergence is not achieved in `maxiter` iterations, an error is
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raised. Must be >= 0.
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args : tuple, optional
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containing extra arguments for the function `f`.
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`f` is called by ``apply(f, (x)+args)``.
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full_output : bool, optional
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If `full_output` is False, the root is returned. If `full_output` is
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True, the return value is ``(x, r)``, where x is the root, and r is
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a `RootResults` object.
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disp : bool, optional
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If True, raise RuntimeError if the algorithm didn't converge.
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Returns
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-------
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x0 : float
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Zero of `f` between `a` and `b`.
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r : RootResults (present if ``full_output = True``)
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Object containing information about the convergence. In particular,
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``r.converged`` is True if the routine converged.
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Examples
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--------
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>>> def f(x):
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... return (x**2 - 1)
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>>> from scipy import optimize
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>>> root = optimize.bisect(f, 0, 2)
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>>> root
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1.0
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>>> root = optimize.bisect(f, -2, 0)
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>>> root
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-1.0
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See Also
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--------
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brentq, brenth, bisect, newton
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fixed_point : scalar fixed-point finder
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fsolve : n-dimensional root-finding
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"""
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if not isinstance(args, tuple):
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args = (args,)
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if xtol <= 0:
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raise ValueError("xtol too small (%g <= 0)" % xtol)
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if rtol < _rtol:
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raise ValueError("rtol too small (%g < %g)" % (rtol, _rtol))
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r = _zeros._bisect(f,a,b,xtol,rtol,maxiter,args,full_output,disp)
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return results_c(full_output, r)
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def ridder(f, a, b, args=(),
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xtol=_xtol, rtol=_rtol, maxiter=_iter,
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full_output=False, disp=True):
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"""
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Find a root of a function in an interval.
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Parameters
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----------
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f : function
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Python function returning a number. f must be continuous, and f(a) and
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f(b) must have opposite signs.
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a : number
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One end of the bracketing interval [a,b].
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b : number
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The other end of the bracketing interval [a,b].
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xtol : number, optional
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The computed root ``x0`` will satisfy ``np.allclose(x, x0,
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atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
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parameter must be nonnegative.
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rtol : number, optional
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The computed root ``x0`` will satisfy ``np.allclose(x, x0,
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atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
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parameter cannot be smaller than its default value of
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``4*np.finfo(float).eps``.
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maxiter : number, optional
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if convergence is not achieved in maxiter iterations, an error is
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raised. Must be >= 0.
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args : tuple, optional
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containing extra arguments for the function `f`.
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`f` is called by ``apply(f, (x)+args)``.
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full_output : bool, optional
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If `full_output` is False, the root is returned. If `full_output` is
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True, the return value is ``(x, r)``, where `x` is the root, and `r` is
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a RootResults object.
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disp : bool, optional
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If True, raise RuntimeError if the algorithm didn't converge.
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Returns
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-------
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x0 : float
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Zero of `f` between `a` and `b`.
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r : RootResults (present if ``full_output = True``)
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Object containing information about the convergence.
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In particular, ``r.converged`` is True if the routine converged.
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See Also
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--------
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brentq, brenth, bisect, newton : one-dimensional root-finding
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fixed_point : scalar fixed-point finder
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Notes
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-----
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Uses [Ridders1979]_ method to find a zero of the function `f` between the
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arguments `a` and `b`. Ridders' method is faster than bisection, but not
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generally as fast as the Brent routines. [Ridders1979]_ provides the
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classic description and source of the algorithm. A description can also be
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found in any recent edition of Numerical Recipes.
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The routine used here diverges slightly from standard presentations in
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order to be a bit more careful of tolerance.
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Examples
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--------
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>>> def f(x):
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... return (x**2 - 1)
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>>> from scipy import optimize
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>>> root = optimize.ridder(f, 0, 2)
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>>> root
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1.0
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>>> root = optimize.ridder(f, -2, 0)
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>>> root
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-1.0
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References
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----------
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.. [Ridders1979]
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Ridders, C. F. J. "A New Algorithm for Computing a
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Single Root of a Real Continuous Function."
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IEEE Trans. Circuits Systems 26, 979-980, 1979.
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"""
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if not isinstance(args, tuple):
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args = (args,)
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if xtol <= 0:
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raise ValueError("xtol too small (%g <= 0)" % xtol)
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if rtol < _rtol:
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raise ValueError("rtol too small (%g < %g)" % (rtol, _rtol))
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r = _zeros._ridder(f,a,b,xtol,rtol,maxiter,args,full_output,disp)
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return results_c(full_output, r)
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def brentq(f, a, b, args=(),
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xtol=_xtol, rtol=_rtol, maxiter=_iter,
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full_output=False, disp=True):
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"""
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Find a root of a function in a bracketing interval using Brent's method.
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Uses the classic Brent's method to find a zero of the function `f` on
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the sign changing interval [a , b]. Generally considered the best of the
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rootfinding routines here. It is a safe version of the secant method that
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uses inverse quadratic extrapolation. Brent's method combines root
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bracketing, interval bisection, and inverse quadratic interpolation. It is
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sometimes known as the van Wijngaarden-Dekker-Brent method. Brent (1973)
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claims convergence is guaranteed for functions computable within [a,b].
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[Brent1973]_ provides the classic description of the algorithm. Another
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description can be found in a recent edition of Numerical Recipes, including
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[PressEtal1992]_. Another description is at
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http://mathworld.wolfram.com/BrentsMethod.html. It should be easy to
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understand the algorithm just by reading our code. Our code diverges a bit
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from standard presentations: we choose a different formula for the
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extrapolation step.
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Parameters
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----------
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f : function
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Python function returning a number. The function :math:`f`
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must be continuous, and :math:`f(a)` and :math:`f(b)` must
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have opposite signs.
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a : number
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One end of the bracketing interval :math:`[a, b]`.
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b : number
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The other end of the bracketing interval :math:`[a, b]`.
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xtol : number, optional
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The computed root ``x0`` will satisfy ``np.allclose(x, x0,
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atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
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parameter must be nonnegative. For nice functions, Brent's
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method will often satisfy the above condition with ``xtol/2``
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and ``rtol/2``. [Brent1973]_
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rtol : number, optional
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The computed root ``x0`` will satisfy ``np.allclose(x, x0,
|
||
|
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
||
|
parameter cannot be smaller than its default value of
|
||
|
``4*np.finfo(float).eps``. For nice functions, Brent's
|
||
|
method will often satisfy the above condition with ``xtol/2``
|
||
|
and ``rtol/2``. [Brent1973]_
|
||
|
maxiter : number, optional
|
||
|
if convergence is not achieved in maxiter iterations, an error is
|
||
|
raised. Must be >= 0.
|
||
|
args : tuple, optional
|
||
|
containing extra arguments for the function `f`.
|
||
|
`f` is called by ``apply(f, (x)+args)``.
|
||
|
full_output : bool, optional
|
||
|
If `full_output` is False, the root is returned. If `full_output` is
|
||
|
True, the return value is ``(x, r)``, where `x` is the root, and `r` is
|
||
|
a RootResults object.
|
||
|
disp : bool, optional
|
||
|
If True, raise RuntimeError if the algorithm didn't converge.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
x0 : float
|
||
|
Zero of `f` between `a` and `b`.
|
||
|
r : RootResults (present if ``full_output = True``)
|
||
|
Object containing information about the convergence. In particular,
|
||
|
``r.converged`` is True if the routine converged.
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
multivariate local optimizers
|
||
|
`fmin`, `fmin_powell`, `fmin_cg`, `fmin_bfgs`, `fmin_ncg`
|
||
|
nonlinear least squares minimizer
|
||
|
`leastsq`
|
||
|
constrained multivariate optimizers
|
||
|
`fmin_l_bfgs_b`, `fmin_tnc`, `fmin_cobyla`
|
||
|
global optimizers
|
||
|
`basinhopping`, `brute`, `differential_evolution`
|
||
|
local scalar minimizers
|
||
|
`fminbound`, `brent`, `golden`, `bracket`
|
||
|
n-dimensional root-finding
|
||
|
`fsolve`
|
||
|
one-dimensional root-finding
|
||
|
`brenth`, `ridder`, `bisect`, `newton`
|
||
|
scalar fixed-point finder
|
||
|
`fixed_point`
|
||
|
|
||
|
Notes
|
||
|
-----
|
||
|
`f` must be continuous. f(a) and f(b) must have opposite signs.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
>>> def f(x):
|
||
|
... return (x**2 - 1)
|
||
|
|
||
|
>>> from scipy import optimize
|
||
|
|
||
|
>>> root = optimize.brentq(f, -2, 0)
|
||
|
>>> root
|
||
|
-1.0
|
||
|
|
||
|
>>> root = optimize.brentq(f, 0, 2)
|
||
|
>>> root
|
||
|
1.0
|
||
|
|
||
|
References
|
||
|
----------
|
||
|
.. [Brent1973]
|
||
|
Brent, R. P.,
|
||
|
*Algorithms for Minimization Without Derivatives*.
|
||
|
Englewood Cliffs, NJ: Prentice-Hall, 1973. Ch. 3-4.
|
||
|
|
||
|
.. [PressEtal1992]
|
||
|
Press, W. H.; Flannery, B. P.; Teukolsky, S. A.; and Vetterling, W. T.
|
||
|
*Numerical Recipes in FORTRAN: The Art of Scientific Computing*, 2nd ed.
|
||
|
Cambridge, England: Cambridge University Press, pp. 352-355, 1992.
|
||
|
Section 9.3: "Van Wijngaarden-Dekker-Brent Method."
|
||
|
|
||
|
"""
|
||
|
if not isinstance(args, tuple):
|
||
|
args = (args,)
|
||
|
if xtol <= 0:
|
||
|
raise ValueError("xtol too small (%g <= 0)" % xtol)
|
||
|
if rtol < _rtol:
|
||
|
raise ValueError("rtol too small (%g < %g)" % (rtol, _rtol))
|
||
|
r = _zeros._brentq(f,a,b,xtol,rtol,maxiter,args,full_output,disp)
|
||
|
return results_c(full_output, r)
|
||
|
|
||
|
|
||
|
def brenth(f, a, b, args=(),
|
||
|
xtol=_xtol, rtol=_rtol, maxiter=_iter,
|
||
|
full_output=False, disp=True):
|
||
|
"""Find root of f in [a,b].
|
||
|
|
||
|
A variation on the classic Brent routine to find a zero of the function f
|
||
|
between the arguments a and b that uses hyperbolic extrapolation instead of
|
||
|
inverse quadratic extrapolation. There was a paper back in the 1980's ...
|
||
|
f(a) and f(b) cannot have the same signs. Generally on a par with the
|
||
|
brent routine, but not as heavily tested. It is a safe version of the
|
||
|
secant method that uses hyperbolic extrapolation. The version here is by
|
||
|
Chuck Harris.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
f : function
|
||
|
Python function returning a number. f must be continuous, and f(a) and
|
||
|
f(b) must have opposite signs.
|
||
|
a : number
|
||
|
One end of the bracketing interval [a,b].
|
||
|
b : number
|
||
|
The other end of the bracketing interval [a,b].
|
||
|
xtol : number, optional
|
||
|
The computed root ``x0`` will satisfy ``np.allclose(x, x0,
|
||
|
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
||
|
parameter must be nonnegative. As with `brentq`, for nice
|
||
|
functions the method will often satisfy the above condition
|
||
|
with ``xtol/2`` and ``rtol/2``.
|
||
|
rtol : number, optional
|
||
|
The computed root ``x0`` will satisfy ``np.allclose(x, x0,
|
||
|
atol=xtol, rtol=rtol)``, where ``x`` is the exact root. The
|
||
|
parameter cannot be smaller than its default value of
|
||
|
``4*np.finfo(float).eps``. As with `brentq`, for nice functions
|
||
|
the method will often satisfy the above condition with
|
||
|
``xtol/2`` and ``rtol/2``.
|
||
|
maxiter : number, optional
|
||
|
if convergence is not achieved in maxiter iterations, an error is
|
||
|
raised. Must be >= 0.
|
||
|
args : tuple, optional
|
||
|
containing extra arguments for the function `f`.
|
||
|
`f` is called by ``apply(f, (x)+args)``.
|
||
|
full_output : bool, optional
|
||
|
If `full_output` is False, the root is returned. If `full_output` is
|
||
|
True, the return value is ``(x, r)``, where `x` is the root, and `r` is
|
||
|
a RootResults object.
|
||
|
disp : bool, optional
|
||
|
If True, raise RuntimeError if the algorithm didn't converge.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
x0 : float
|
||
|
Zero of `f` between `a` and `b`.
|
||
|
r : RootResults (present if ``full_output = True``)
|
||
|
Object containing information about the convergence. In particular,
|
||
|
``r.converged`` is True if the routine converged.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
>>> def f(x):
|
||
|
... return (x**2 - 1)
|
||
|
|
||
|
>>> from scipy import optimize
|
||
|
|
||
|
>>> root = optimize.brenth(f, -2, 0)
|
||
|
>>> root
|
||
|
-1.0
|
||
|
|
||
|
>>> root = optimize.brenth(f, 0, 2)
|
||
|
>>> root
|
||
|
1.0
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
fmin, fmin_powell, fmin_cg,
|
||
|
fmin_bfgs, fmin_ncg : multivariate local optimizers
|
||
|
|
||
|
leastsq : nonlinear least squares minimizer
|
||
|
|
||
|
fmin_l_bfgs_b, fmin_tnc, fmin_cobyla : constrained multivariate optimizers
|
||
|
|
||
|
basinhopping, differential_evolution, brute : global optimizers
|
||
|
|
||
|
fminbound, brent, golden, bracket : local scalar minimizers
|
||
|
|
||
|
fsolve : n-dimensional root-finding
|
||
|
|
||
|
brentq, brenth, ridder, bisect, newton : one-dimensional root-finding
|
||
|
|
||
|
fixed_point : scalar fixed-point finder
|
||
|
|
||
|
"""
|
||
|
if not isinstance(args, tuple):
|
||
|
args = (args,)
|
||
|
if xtol <= 0:
|
||
|
raise ValueError("xtol too small (%g <= 0)" % xtol)
|
||
|
if rtol < _rtol:
|
||
|
raise ValueError("rtol too small (%g < %g)" % (rtol, _rtol))
|
||
|
r = _zeros._brenth(f,a, b, xtol, rtol, maxiter, args, full_output, disp)
|
||
|
return results_c(full_output, r)
|